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Popović, Lukša; Rossner, Moritz J.; Wehr, Michael C. (2024): Protocol for identifying properties of ERBB receptor antagonists using the barcoded ERBBprofiler assay. STAR Protocols, 5 (2): 102987. ISSN 26661667

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Abstract

The ERBBprofiler assay measures compound effects on ERBB family receptors and key downstream signaling pathways that are implicated in cancer or other complex diseases. Here, we present a protocol for identifying properties of ERBB receptor antagonists using the barcoded ERBBprofiler assay. We describe steps for in-solution transfection, cell treatment, combined processing of samples, amplification and indexing of PCRs, sequencing, and data analysis. This approach allows for the simultaneous assessment of drug effects and cell-type-dependent effects.

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